#Line structure chemistry calculator license#

Undo/redo: undo or redo your recent changes.Eraser: erase atoms, bonds or the current selection.Once you’ve drawn a molecule, you can click the 2D to 3D button to convert the molecule into a 3D model which is then displayed in the viewer. The structural formula editor is surround by three toolbars which contain the tools you can use in the editor. MolView consists of two main parts, a structural formula editor and a 3D model viewer.

#Line structure chemistry calculator license#

Crystallography Open Database (~300.000 crystals).

The PubChem Project (~51 million compounds).

RCSB Protein Data Bank (~100.000 macromolecules).

ChemDoodle Web Components v6.0.1: 3D render engine and spectrum display.

Ketcher: Chemical 2D data reader/writer.

The Virtual Model Kit has been a source of inspiration for the birth of this project. This web application is built on top of the JavaScript libraries and online services listed below. You can use MolView to search through different scientific databases including compound databases, protein databases and spectral databases, and view records from these databases as interactive visualizations using WebGL and HTML5 technologies. As more come up, I’ll add them.MolView is an intuitive, Open-Source web-application to make science and education more awesome! MolView is mainly intended as web-based data visualization platform.

Here’s a table with some representative examples.

There are some additional tricks with structural formulas that don’t involve brackets but are still important to know.Ĭarboxylic acids are represented by CO 2H (or COOH)Įsters are represented by CO 2R (or COOR) Some Representative Examples That helps to highlight a useful rule of thumb: look to the left of the bracket t o see which atom it’s attached to. For example CH 3CH(CH 3)CH 2CH 3 depicts a 4-carbon chain where the CH 3 in brackets is directly attached to the carbon before it. So CH 3C(O)CH 3 implies that the second carbon is double-bonded to an oxygen.īrackets can also be used to show branching. An equivalent (but less efficient) way to write the structure would be CH 3C(CH 3) 3.Ĭarbonyl oxygens (that’s C=O) can also be dealt with by putting them in brackets. So put the CH 3 groups in brackets and write C(CH 3) 4. C CH 3 4 is a little better but having those numbers next to each other is confusing (it looks like CCH 34). You wouldn’t write it CH 3CH 3CH 3CH 3C writing it like that implies a chain, and each of those CH 3 groups can only be attached to one thing. In organic chemistry, we use brackets in exactly the same way.Ĭonsider a case where you have four CH 3 groups attached to a carbon. Think back to math: there’s a difference between 4 + 2 * 3 and (4+2)*3. Using brackets is a no brainer.Ī second use of brackets is to reduce ambiguity. Much less work, right? Chemists gravitate towards solutions that involve doing less work. They can 1) reduce the amount of work, and 2) remove ambiguity from a structure.įor example, consider the difference between writingĬH 3CH 2CH 2CH 2CH 2CH 2CH 2CH 3 and CH 3(CH 2) 6CH 3. What’s The Purpose Of Using Brackets?īrackets help in two ways. In between those two extremes, there are a few tricky things to keep track of. It’s pretty much impossible to draw a useful condensed formula for something like morphine. It’s easy for simple hydrocarbons like propane: CH 3CH 2CH 3. In the days before word processors and graphics programs made it a cinch to include pictures, condensed formulae were the method of choice when you wanted to convey the structure of something without actually having to draw it. It’s a way of depicting molecules completely in text form.

The third level of detail is the line diagram, where carbon-carbon bonds are represented with lines, and hydrogens are omitted entirely.Ī somewhat intermediate place within these formulae is what we call the “ condensed formula“.

The second-highest level of detail is the structural formula, which replaces those dots with lines.

The highest level of detail is the Lewis dot structure, which shows where all the electrons are with dots.

Recall that there are at least 4 major ways of representing molecules that you’re introduced to in the first week of ochem.